Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILS----LLEK-DQELKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK
4I0U Chain:A ((168-235))
-------------------------YLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSL-----
General information:
TITO was launched using:
RESULT:
Template:
4I0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7032 for 281 contacts (-25.0/contact) +
2D Compatibility (PS) -6977 + (NN) -4793 + (LL) 2388
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -23664.0 ( -84.21 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_4I0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I0U-query.scw
PDB file :
Tito_Scwrl_4I0U.pdb
: