Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSRVLNQLNVPSLATGFLGGFTGSFIKDWLQNEGVKTGFVTVKDDTRINIKLKH-GEETEINGLGPAISEKEINEFLKVMDKVTAN-DIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMIDTTGQELLDAL--PNRPILIKPNHHELADLFGVKLG-SVEELIPYGKKCLELGAQHVIVSMAGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATGGATAFSTDLAQKELIDELLPQVKITKITGRN |
2JG1 Chain:A ((22-280)) | -ILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGI---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120827 for 1947 contacts (-62.1/contact) +
2D Compatibility (PS) -27496 + (NN) -4252 + (LL) 3476
1D Compatibility (HY) -17600 + (ID) 4800
Total energy: -171499.0 ( -88.08 by residue)
QMean score : 0.525
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