Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGS------NKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKETQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSIHQAINGSGSQTLLGGANQLTAGLKSAQAGSAKLVAGTNQLNSQVPTLTSGVGQLAAGSASMENGLSKLNDGGNKLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSNQLAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELTDKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGALVFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFFGTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHPFLPMTYSIYAFRESLAAGMGPNVYSMSMLILTIIMVACVGLLYLSMSHLKKRHDAHESALDDNQKLMALEN |
2YO3 Chain:A ((76-251)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKTNTDGADANAQGADSVAIGSGSIAAAENSVALGTNSVADEANTVSVGSSTQQRRITNVAAGVNN--------TDAVNVAQLKA-SEAGSVRYETNADGSVNYSVLNLGDGSGGTTRIGNVSAAVNDTDAV------NYAQLKRSVEEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIEN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28667 for 851 contacts (33.7/contact) +
2D Compatibility (PS) -17519 + (NN) 833 + (LL) 46496
1D Compatibility (HY) -4000 + (ID) 1950
Total energy: 52527.0 ( 61.72 by residue)
QMean score : 0.188
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