Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKKDANVKDA-AVLGQSMQTLKRESDDKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILNRELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLTDKDLTTIDHKEFLNQIPGYSAEQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIISIISILISVGVTLILPSIMPAAMPFRLSPMTIALYSGLFFLVALFGALLSLRRIAKVDALDAIRGGDE |
| 2B39 Chain:A ((757-832)) | -------------------------------------------------------------EDIISRSQFPESWLWTVIEDLKQADKNGISTKLMNVFLKDS-----------ITTWEILAVSLSDKKGICVADPYEVTV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11872 for 265 contacts (44.8/contact) +
2D Compatibility (PS) -6866 + (NN) -1151 + (LL) 24160
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: 21965.0 ( 82.89 by residue)
QMean score : 0.278
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