Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGGQLSTLYPEKYIYDIPGYPSVRAQELVNNLIQQMKPFDPTVALEEAVQSVEKQVDGTFEIITKKDTHYSKAIIITAGNGAFEPRRLDLPEAEQYEGTNIHYF-INDLSRFSGRRVAVCGGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLG--NGDKLT-HITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKNWGLELERNS-IVVNSKMETSIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE |
| 3F8P Chain:A ((16-319)) | -------FDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQLTE---AGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIEN----EFVVKTKRKGEF-KADSVILGIGV-KRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKP---NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200916 for 2596 contacts (-77.4/contact) +
2D Compatibility (PS) -31793 + (NN) -10644 + (LL) 2820
1D Compatibility (HY) -21600 + (ID) 4200
Total energy: -266333.0 ( -102.59 by residue)
QMean score : 0.479
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