Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQEKQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMVKPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTTSEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENVIKTIWGVGYKIEI
4KFC Chain:A ((4-225))
--ANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAV-PVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS---APDPL----VKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITATGIGYRF--
General information:
TITO was launched using:
RESULT:
Template:
4KFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155531 for 1652 contacts (-94.1/contact) +
2D Compatibility (PS) -23826 + (NN) -14108 + (LL) 1000
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -209815.0 ( -127.01 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4KFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KFC-query.scw
PDB file :
Tito_Scwrl_4KFC.pdb
: