Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRLLSIAFFGIAVICLLFPWMSSGIDAATFELVYEPAYKLIWMQPIIIVGYLGFLCTIFIPKFQRGKNRIVPFIGILILVLGLLNLAVRPLFG-FDSFNFSIIDAYVSELVEPAFLIAVSASILSLIMYAIYLKKSENL
1EHK Chain:A ((25-57))
-------------------------------------------------------------------------------LVLGFLALIVGSLFGPFQALNYGNVDAY---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EHK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5564 for 106 contacts (-52.5/contact) +
2D Compatibility (PS) -2627 + (NN) -614 + (LL) 11100
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -3655.0 ( -34.48 by residue)
QMean score : -0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1EHK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EHK-query.scw
PDB file :
Tito_Scwrl_1EHK.pdb
: