Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKITPPQPFLFEKGKRAVLLLHGFTGSSADVRILGRFLQENNYTCYAPQYRGHG-VSP-DLLLKTGPNDWWEDVLEAYDHLKSLGYTEIAVAGLSLGGLFSLKLGFSRPLKGIIA---MSTPTRMDSSSPIIQGFLDYVRNYKKLEGKTTEQIDAEMVAYKDAPMNTIAKLKDEISGVVAEIDMIYAPIMVVQGEKDDMVDVSGAQLIYDT-VESTKKELHWFKESGHVITLDKERKEVNQAILTFLDSLDWQE
3DYV Chain:A ((13-245))-----PQPFEYEGTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTA-KYAKVFVFGLSLGGIFAMKA--LETLPGITAGGVFSSPI-LPGKHHLVPGFLKYAEYMNRLAGKSDE--STQILAYLPGQLAAIDQFA---TTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFM-------


General information:
TITO was launched using:
RESULT:

Template: 3DYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105087 for 1931 contacts (-54.4/contact) +
2D Compatibility (PS) -23850 + (NN) -5016 + (LL) 1556
1D Compatibility (HY) -21200 + (ID) 3750
Total energy: -157347.0 ( -81.48 by residue)
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3DYV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DYV-query.scw
PDB file : Tito_Scwrl_3DYV.pdb: