Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQEL---VRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK
3UWY Chain:A ((1-253))
MRTPIIAGNWKMNKTVQEAKDFVNALPT-LPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
General information:
TITO was launched using:
RESULT:
Template:
3UWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122427 for 2131 contacts (-57.5/contact) +
2D Compatibility (PS) -27591 + (NN) -14150 + (LL) -80
1D Compatibility (HY) -23600 + (ID) 7950
Total energy: -195798.0 ( -91.88 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3UWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWY-query.scw
PDB file :
Tito_Scwrl_3UWY.pdb
: