Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEIDKLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQYDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREHVSIFPASHFVTRPDIMKKAIVNIKAELEDRLKVLRADNKLLEAQRLEQRTNYDLEMMEEMGYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQMLVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDPIVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVKTLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGRAARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATSAADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG |
| 1D9Z Chain:A ((2-594)) | -EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRNDI-F-RGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIE--REVDALTGKVLGEREHVAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSPGVVEQIIRPTGLLDPTIDVRPTKGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIMYADTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDV--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200813 for 4704 contacts (-42.7/contact) +
2D Compatibility (PS) -63723 + (NN) -14801 + (LL) 6460
1D Compatibility (HY) -76400 + (ID) 23550
Total energy: -372827.0 ( -79.26 by residue)
QMean score : 0.428
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