Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTIGCDHGGRRLKDAIVKHLREKDIEVVDIGTYTDESVDFPSYAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSNILCLGERVIGEGLALLLVDTWLEASFAGDRHKRRLDKITELERK
3S5P Chain:A ((22-160))
MKVAFASDHGGRDLRMFLQQRASAHGYEVMDLGT--------PDFAKIGCEAVTSGRADCCILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGRTTGPEVAASILSRFLSTNFEGGRHAARIAK-------
General information:
TITO was launched using:
RESULT:
Template:
3S5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116789 for 1082 contacts (-107.9/contact) +
2D Compatibility (PS) -14390 + (NN) -7989 + (LL) 1196
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -149572.0 ( -138.24 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_3S5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S5P-query.scw
PDB file :
Tito_Scwrl_3S5P.pdb
: