Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
2RAI Chain:A ((397-436))
----------QKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQ-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RAI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6680 for 150 contacts (44.5/contact) +
2D Compatibility (PS) -4087 + (NN) -1275 + (LL) 2968
1D Compatibility (HY) 1600 + (ID) 350
Total energy: 5536.0 ( 36.91 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_2RAI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RAI-query.scw
PDB file :
Tito_Scwrl_2RAI.pdb
: