Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAIKESYIDGMIQSVENNGPYIVIAKHIALAHTRPEFGVIHGGLTFATLADGVAFGSDMFDPVKLIITLAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG
2FEW Chain:A ((10-136))
--------ENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPQGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNE-HIQVITSLTNALDDESVIERLAHTTS------------
General information:
TITO was launched using:
RESULT:
Template:
2FEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91642 for 996 contacts (-92.0/contact) +
2D Compatibility (PS) -13683 + (NN) -6777 + (LL) 1688
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -119314.0 ( -119.79 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2FEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEW-query.scw
PDB file :
Tito_Scwrl_2FEW.pdb
: