Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAVGIRANTAKDIRAIQSEIDVPIIGIYKKDYDDSDVFITPTLKEVREICETGVEIVAMDATTRKRPHNEDLKDILSAIRKEFPNTLFMADTASIEDVYYADSLGFDLIGTTLYGYTEETANKNISDDDFSHLKEVLKSTKRPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQEITTRFTNEIQKIQEERGK
3Q58 Chain:A ((17-229))
---------NGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRP--VDIDSLLTRIRLH--GLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITP---VEPDLAMVTQLSHAGCR-VIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVKR-------
General information:
TITO was launched using:
RESULT:
Template:
3Q58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127784 for 1824 contacts (-70.1/contact) +
2D Compatibility (PS) -23174 + (NN) -12902 + (LL) 1212
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -182098.0 ( -99.83 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_3Q58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q58-query.scw
PDB file :
Tito_Scwrl_3Q58.pdb
: