Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIE-FDEAFNENLKGVSRIDSLLLILRKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKSTGLLDLRILEILHSK
1Z4O Chain:A ((2-189))
----FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKIL--DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPA-VAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100936 for 1566 contacts (-64.5/contact) +
2D Compatibility (PS) -20123 + (NN) -11002 + (LL) 2616
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -151295.0 ( -96.61 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4O-query.scw
PDB file :
Tito_Scwrl_1Z4O.pdb
: