Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKPNVVQLNNQYINDENLKKRYEAEELRRKNRLMGW--VLIFVMLLFILPTYNLVKSYRTLQERRQE----VVKLTKDYQTLTNRTENQKLLAKQLKNPDYVQKYARAKYYFSKTGEMIYPLPDLLPK |
4KV9 Chain:A ((115-201)) | --KPVVDYIDNQFEN-------YLQEELKMKRSMQAFHDTRVHVCLYFIAPTGHSLKSIDLVAMKKLENKVNVIPVIAKSDTIT-KSELQKFKARILSEIQSNEIGIYQFPTDDEAVSETNSVMNQHIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3617 for 411 contacts (8.8/contact) +
2D Compatibility (PS) -8585 + (NN) 868 + (LL) 452
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -9848.0 ( -23.96 by residue)
QMean score : 0.100
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