Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVT--ERVSIIHTEEKINS--DDEPAKAVRRK-----------KQSSMVLGAKAVKDGVAQAFISAG--NTGALLAAGLFVVGRIKGVDRPGLMSTMPTL-----DGVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIEVPRVGLLNNGTEETKGDS---LHKEAYELLAA-EPSINFIGNIEARDL--------------MSSVADVVVT-DGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
| 2AF4 Chain:C ((17-331)) | -KTIALP--ETE-DI-RTLQAAAKILER-GIADIVLVGNEADIKALAGDLDLSKAKIVDPKTYEKKDEYINAFYELRKHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPDCEYGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFEL-LVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQR-------------------------------------LAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAAQDK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128685 for 2368 contacts (-54.3/contact) +
2D Compatibility (PS) -29704 + (NN) -10209 + (LL) 4380
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -171468.0 ( -72.41 by residue)
QMean score : 0.435
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