Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKRALISVSDKSGIIDFAKELKNLGWDIISTGGTKVALDDAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDSADYATVLGELADASQTTFKTRQRLAAKAFRHTAAYDALIAEYFTAQVGEA-KPEKLTITYDLKQAMRYGENPQQDADFYQKALPTDYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKDSPTVVALKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAEKMHPIFLEIIIAPSYSEEALAILTNKKKNLRILELPFDAQAASEVEAEYTGVVG-GLLVQNQDVVAENPSDWQVVTDRQPTEQEATALEFAWKAIKYVKSNGIIITNDHMTLGLGAGQTNRVGSVKIAIEQAKDHLDGAVLASDAFFPFADNIEEIAAAGIKAIIQPGGSVRDQESIDAANKHGLTMIFTGVRHFRH |
1ZCZ Chain:A ((14-464)) | --KRILVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPEPR--------------WDVVFVDLYP------PPD---------IDIGGVALLRAAAKNWKKVKPAFDMETLKLAI-EIDDE-----ETRKYLAGMTFAFTSVYDSIRANQFVEGISLAFKREDLQ--------LRYGENPHEKAFVYGK---PAFEILH----EGKTISFNNILDAENAWFMAKNLPRMGAVV-VKHQSPCGAAIGEDKVEIVKKAIEADDESSFGGILAVNFEMDEEVAKSLKK-YLEVIVAPSFTQEAIEVLSKKK--VRLLK-PGDY-------ASWAGKMAFGSLVLSERKYPEG--NFELVVGEPLSEKELEDLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRVFRH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205862 for 3707 contacts (-55.5/contact) +
2D Compatibility (PS) -48585 + (NN) -14234 + (LL) 5360
1D Compatibility (HY) -34400 + (ID) 9050
Total energy: -306771.0 ( -82.75 by residue)
QMean score : 0.478
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