Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPHLSKEAFKKQIKNGIIVSCQALPGEPLYTESGGVMPLLALAAQEAGAVGIRANSVRDIKEIQEVTNLPIIGIIKREYPPQEPFITATMTEVDQLASLDIAVIALDCTLRERHDGLSVVEFIQKIKRKYPEQLLMADISTFEEGKNAFEAGVDFVGTTLSGYTDYSRQEEGPDIELLNKLCQAGIDVIAEGKIHTPK-QANEINHIGVAGIVVGGAITRPKEIAERFISGLS
3Q58 Chain:A ((17-223))
-------------NGGLIVSCQPVPGSP--MDKPEIVAAMAQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSR--PVDIDSLLTRIRLH--GLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVE-PDLAMVTQLSHAGCRVIAEGRYNTPALAANAIEH-GAWAVTVGSAITRIEHICQWFSHAVK
General information:
TITO was launched using:
RESULT:
Template:
3Q58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103923 for 1784 contacts (-58.3/contact) +
2D Compatibility (PS) -22095 + (NN) -11761 + (LL) 1376
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -156853.0 ( -87.92 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_3Q58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q58-query.scw
PDB file :
Tito_Scwrl_3Q58.pdb
: