Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKTFSAYNFLTALILCLLTVLFIFPFYWIMTGAFKSQPDTIIIPPQWWPKAPTLENFKALTVQNPALRWLWNSVFISIMTMFLVCCTSSMAGYVLAKKRFYGQKIL------FSLFIAAMALPKQVVLVP-LVRIINFMGIHDTLWAVILPLVGWPFGVFLMKQFSENIPTELLESAKIDGCGEIRTFINVAFPIVKPGFAALAIFTFINTWNDYFMQLVMLTSRNNLTISLGVATMQAEMATNYGLIMAGAALAAVPIVTVFLVFQKSFTQGITMGAVKG
3PUW Chain:G ((80-296))------------------------------------------------------------------PVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG


General information:
TITO was launched using:
RESULT:

Template: 3PUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165314 for 1492 contacts (-110.8/contact) +
2D Compatibility (PS) -21686 + (NN) -3046 + (LL) 5612
1D Compatibility (HY) -18000 + (ID) 3150
Total energy: -205584.0 ( -137.79 by residue)
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_3PUW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUW-query.scw
PDB file : Tito_Scwrl_3PUW.pdb: