Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDLQKYQGIIPAFYACYDDKGDICPERVKALTNYFIDKGVQGLYVNGSSGECIYQSVADRKLVLENVMSVAKGKLTVIAHVACNNTKDSVELAMHAEAIGVDAIAAIPPIYFRLPEYAIADYWNTISQAAPQTDFIIYNIPQLAGVALTSDLYRKMLQNPQVIGVKNSSMPVQDIQNFVAIGGENH--IVFNGPDEQFLGGRLMGAAAGIGGTYGVMPELYLTLNQLIVDKDLEKARELQFTINDIITKLCSGHGNMYAVIKSVLEINEQLTIGSVRLPLASVTEEDKPIIKEAAEMIRHAKKQFC
3LBM Chain:A ((28-318))-------RGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTS---GDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLIK--TGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER----


General information:
TITO was launched using:
RESULT:

Template: 3LBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203900 for 2547 contacts (-80.1/contact) +
2D Compatibility (PS) -31156 + (NN) -14061 + (LL) 1152
1D Compatibility (HY) -23200 + (ID) 4700
Total energy: -275865.0 ( -108.31 by residue)
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3LBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LBM-query.scw
PDB file : Tito_Scwrl_3LBM.pdb: