Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRTVAIDIGGTMIKHGIVDNLGCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDGIAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHL----------SDGDFQDLASTTALI-------------ADVAKAHGD-EISRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVF-AQHENQAGMLGAYYHFKNRG |
| 3VGL Chain:A ((2-306)) | -GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTA--EGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFA-PNI-DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181769 for 2571 contacts (-70.7/contact) +
2D Compatibility (PS) -29873 + (NN) -9175 + (LL) -356
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -243173.0 ( -94.58 by residue)
QMean score : 0.456
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