Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIYDQIESALDLMTDLEREIACYFMGQPISKDALASTIVTKQLHISQAALTRFAKKCGFKGYREFVFEYLKSHETISQQLYGLQNDNTKKVFMNYQEMVSKSADIIDEEQLLEVSHMIEQADRVYFYGKGSSSLVAKEFKIRLMRLGVICEALDDTDSFSWTNSIVN-------DRCLVIAFSLSGNTNSVIGALKIASSHGAKTVLFTKQPHT--IDYAFDKIIQVASARHLDYGNRISPQIPMLIMVDIIYAQFLDINKIEKERIFRETIIQR |
3FKJ Chain:A ((41-145)) | --------------------------------------------------------------------------------------------------------------------------ERVWFVGCGGSLTGFWPGKYFLD-----CEASKLAVGYITSNEFVHATPKALGKNSVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYS-DYIIEYQWARYPETVDPAQQKAAYSLWLALEILAQTEGYAQYDELVSAFGRFSD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48307 for 702 contacts (-68.8/contact) +
2D Compatibility (PS) -10187 + (NN) -1712 + (LL) 11432
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -54424.0 ( -77.53 by residue)
QMean score : 0.511
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