Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLERYSRPEMAAIWTEENKYRAWLEVEILADEAWAELGEIPKEDVTKIREKADFDIDRILEIEQDTRHDVVAFTRAVSETLGEERKWVHYGLTSTDVVDTAYGYLYKQANDIIRRDLENFTNIVAEKAKEHKFTIMMGRTHGVHAEPTTFGLKLATWYSEMKRNIERFEHAAAGVEAGKISGAVGNFANIPPF---VEEYVCDKLGIHPQEISTQVLPRDLHAEYFAVLASIATSIERMATEIRGLQKSEQREVEEFFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGHMVTAYENVALWHERDISHSSAERIITPDTTILIDYMLNRFGNIVKNLTVFPENMMRNMESTFGLIYSQRVMLKLIEKGMTREEAYDLVQPKTAYSWDNQVDFKPLLEEDTKVTSCLTQEELDELFNPIYYTKRVDDIFERLGLEK |
1DOF Chain:A ((9-386)) | ---RYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKV-NKASVSADEV--------HDILSLVLLLEQKSG--CRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIACRQLALAEEFIRA-KIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLAVEIRELSRPEIGEV----VEGG---------ANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSLKLC----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DOF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120394 for 2943 contacts (-40.9/contact) +
2D Compatibility (PS) -37708 + (NN) -11283 + (LL) 4132
1D Compatibility (HY) -24000 + (ID) 6200
Total energy: -195453.0 ( -66.41 by residue)
QMean score : 0.532
|
|
|