Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEITSAKAMARTVRVSPRKTRLVLDLIRGKNVADAIAILKFTPNKAARVIEKTLNSAIANAENNFGLEKANLVVSETFANEGPTMKRFRPRAKGSASPINKRTTHVTVVVSEK
4CSU Chain:S ((5-110))
--------AKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR
General information:
TITO was launched using:
RESULT:
Template:
4CSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25192 for 727 contacts (-34.7/contact) +
2D Compatibility (PS) -11460 + (NN) -3223 + (LL) 892
1D Compatibility (HY) -6400 + (ID) 2900
Total energy: -48283.0 ( -66.41 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_4CSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CSU-query.scw
PDB file :
Tito_Scwrl_4CSU.pdb
: