Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERNQRKTLYGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIVRIMETRPLSATKRFRLVEVVEKAVII
4A2I Chain:Q ((5-82))
------RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAV--
General information:
TITO was launched using:
RESULT:
Template:
4A2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5654 for 488 contacts (-11.6/contact) +
2D Compatibility (PS) -8122 + (NN) 594 + (LL) 960
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -20872.0 ( -42.77 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_4A2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A2I-query.scw
PDB file :
Tito_Scwrl_4A2I.pdb
: