Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIADILKREGFVKNVEVIEDDKQGIIRVFLKYGQN-------GERVITNLKRISKPGLRVYTKHEDMPKVLNGLGIAIVSTSEGLLTDKEARQKNVGGEVLAYIW
1HNW Chain:H ((1-138))
-MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
General information:
TITO was launched using:
RESULT:
Template:
1HNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80769 for 968 contacts (-83.4/contact) +
2D Compatibility (PS) -13989 + (NN) -1058 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -112708.0 ( -116.43 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_1HNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNW-query.scw
PDB file :
Tito_Scwrl_1HNW.pdb
: