Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINHKLNDLIKK-YEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH |
3FII Chain:A ((310-359)) | ----------------EYDINEYKDYFQWKYGLDKNADGSYTVNENKFNEIYKKLYSFTEIDLANKFKVKCRNTYFIKYGFLKVPNLLDDDIYTVSEGFNIGNLAVNNRGQNIKLNPKI--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1731 for 220 contacts (7.9/contact) +
2D Compatibility (PS) -5046 + (NN) 719 + (LL) 2660
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -3436.0 ( -15.62 by residue)
QMean score : -0.002
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