Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVN-----RDHKHEELSPDVVPVENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMS----TVDSLNESDPR--VVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
| 4MUQ Chain:A ((17-195)) | ------------------------------------------------------------------NLLLVNKNYPLRDNNVKGLVPADIRFPNILMKRDVANVLQLIFEKISAGNSIVP-VSGYRSLEEQTAIYDGSL-----------KDNGEDFTRKYVALPNHSEHQTGLAIDLGLNKKDIDFIRPDFPYDGICDEFRRAAPDYGFTQRYARDKEEITGISHEPWHFRYVGYPHSKIMQENGFSLEEYTQFIKAYLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23742 for 1271 contacts (-18.7/contact) +
2D Compatibility (PS) -17673 + (NN) -6555 + (LL) 5720
1D Compatibility (HY) -14000 + (ID) 2800
Total energy: -59050.0 ( -46.46 by residue)
QMean score : 0.466
|
|
|