Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKK---DSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
3QRH Chain:A ((6-61)) | --------------------------------------------------------------------------------------------------------------------------------MDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3544 for 222 contacts (16.0/contact) +
2D Compatibility (PS) -5842 + (NN) -2937 + (LL) 8688
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 703.0 ( 3.17 by residue)
QMean score : 0.420
|
|
|