Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRYKAQISYDGSAFSGFQR-QPNCRTVQEEIERTLKRL-----NSGNDV---IIHGAGRTDAGVHAYGQVIHFDLPQARDV-EKLRFGLDTQCPDDIDIVKVEQVSDDFHCRYDKHIKTYEFLVDIGRPKNPMMRNY--ATHYPYPVIIELMQEAIKDLV---GTHDFTGFTAS-GTSVENKVRTIFDAKIQFEASKNLLIFTFT---GNGFLYKQVRNMVGTLLKIGNGRMPISQIKTILQAKNRDLAGPTAAGNGLYLKEIIYEDKECFSNFRK |
| 4IQM Chain:A ((18-269)) | -------MAYSGKGYHGMQRN---FKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILEKI----NSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLL----PTFAFAHKDRDVQDETYRLSAETLQQVNRLLACYKGTHNFHNFTSQKGPQDPSACRYILEMYCEEPFVREGLEFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKVDV--PKAPGLGLVLERVHFEKYNQPLDWAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84520 for 1634 contacts (-51.7/contact) +
2D Compatibility (PS) -24462 + (NN) -7202 + (LL) 944
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -133340.0 ( -81.60 by residue)
QMean score : 0.372
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