Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHGHYDDALEC----IEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAMVE-TGIDFLAAGIGNIHGPYPANWEG-LDLDHLKKLTEAVPGFPIVLHGGSGIPDD---------------------QIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
2ISW Chain:A ((2-307)) | -PLCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYL-KKLCEAALEKHP-DIPICIHLDHG---DTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTL----------VQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKS--RLAIDRVKTISD-LTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEK---------FDPRDYLGPGRDAITEMLIPKIKAFGSAGHA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ISW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129839 for 2296 contacts (-56.6/contact) +
2D Compatibility (PS) -30013 + (NN) -22829 + (LL) 1528
1D Compatibility (HY) -21600 + (ID) 6000
Total energy: -208753.0 ( -90.92 by residue)
QMean score : 0.611
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