Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKYILKRVAILLVTLWVVITLSFFLMQILPGTPYNNPKLTEEMIALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHKNDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPLSGWGTFSQTILPSLALGLPTL--ASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIFSIPGIGQQFVTSIPTKDYPVIMGTTIVYAVMLMVAILITDVVISIVDPRVRLQ |
4M9A Chain:B ((317-366)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLPCLSEASQAKLFASEMAEAVCSDAIQIHGGYGFLVDYEVERH-YRDARITQIYEGTSEVQRMVIARQL---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2382 for 241 contacts (9.9/contact) +
2D Compatibility (PS) -4911 + (NN) -837 + (LL) 18592
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 11476.0 ( 47.62 by residue)
QMean score : 0.175
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