Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHDTTEIEIAMKRPYRYDYGQFTFLKIYQAGFESAAHPFSISGGHDR--VIFLTVKAS-----------GDYTKSIYKQLKVGTKIALDRAYGHMLFDKDKKEQVWIAGGIGITPFISFIREN--SILTKR-VDFFYTFSNQDNLIYQDMLESYAKANPNFKLHLNNSSLQGRLDFS-------QSVFEG---------QPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
4UAJ Chain:A ((38-262)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRAGGYIQ-IEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSYIW-SLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFGG--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105998 for 1353 contacts (-78.3/contact) +
2D Compatibility (PS) -20485 + (NN) -1887 + (LL) 21724
1D Compatibility (HY) -15600 + (ID) 2400
Total energy: -124646.0 ( -92.13 by residue)
QMean score : 0.310
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