Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIATINKNDLIALGFSEGTSKRIIRQGKELLIARGFRVYQNKRIGTIPASIATELLGFDVQNSSLSRG
4MNA Chain:A ((368-403))
---------------SNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFS
General information:
TITO was launched using:
RESULT:
Template:
4MNA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -931 for 157 contacts (-5.9/contact) +
2D Compatibility (PS) -3507 + (NN) 949 + (LL) 1300
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -4839.0 ( -30.82 by residue)
QMean score : 0.045
(partial model without unconserved sides chains):
PDB file :
Tito_4MNA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MNA-query.scw
PDB file :
Tito_Scwrl_4MNA.pdb
: