Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIDKKEFLALIASIILLIFASVTFFLFKDHGTTQMDTVESSVNHVSDSQLTEAQDMLDKFEKKPSEKLLKDVELALNKLSNSSKKEALQKRFKKAKDKYLKDEADKKATKDATDLVEILEQAPSE----ENVLKAEAAVNKLTVKESKEALQKRIDTVKTQYGLIGNQTPSSSVAETTEQGTANPASQDTSSYVNQNVAPTYEQPQTNNTPVTPGVNNTVPTPGTGTAPATNGTGVAQ |
1US7 Chain:B ((293-348)) | ------------------------------------------------------------------------------------------------------------------DPVEVYESLPEELQKC----MLQDAISKMDPTDAKYHMQRCIDS-----GLWVPNSKA------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1US7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 10049 for 245 contacts (41.0/contact) +
2D Compatibility (PS) -4927 + (NN) -3002 + (LL) 11264
1D Compatibility (HY) -2800 + (ID) 700
Total energy: 9884.0 ( 40.34 by residue)
QMean score : 0.498
|
|
|