Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKEAVDG-QVRALNAAGVEITDFNKGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK |
2PZ8 Chain:A ((1-272)) | MTLQEQIMKALHVQPVIDPKAEIRKRVDFLKDYV-KKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGG-NATFIAVRLPYKVQKDEDDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTKRQGRALLQELGADERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLEGKTVPADVAEKIEKRYTVSEHKRQVPASMFDDWWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63510 for 2220 contacts (-28.6/contact) +
2D Compatibility (PS) -29358 + (NN) -10511 + (LL) 280
1D Compatibility (HY) -23200 + (ID) 8100
Total energy: -134399.0 ( -60.54 by residue)
QMean score : 0.459
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