Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKYYIVIGYLISMLITVAGVFFGLNHMLIETRGVYYILSVTIIACIVGGIVNLFLLSSVFTSLKKLKQKMKDISQRCFDTKAQICSPQEFKDLETAFNQMSSELESTFKSLNESEREKTMMIAQLSHDIKTPITSIQSTVEGILDGIISEEEVNYYLNTISRQTNRLNHLVEELSFITLETMSDTAEPHKEETIYLDKLLIDILSEFQLVFEKENRQVMIDVAPDVSKLSSQYDKLSRILLNLISNAVKYSDPGSPLTIKAYSNRQDIVIDIIDQGYGIKDEDLASIFNRLYRVESSRNMKTGGHGLGLYIARQLAHQLNGDILVESQYQKGSKFSLVLKLQK |
| 4BIZ Chain:A ((62-296)) | ----------------------------------------------------------------------------------------------AGASFNQMVTALERMMTS-------QQRLLSDISEELRTPLTRLQLGT-ALLRRRSGESK---ELERIETEAQRLDSMINDLLVMSRNQQKNAL---VSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSH--TKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83709 for 1687 contacts (-49.6/contact) +
2D Compatibility (PS) -24000 + (NN) 1691 + (LL) 8980
1D Compatibility (HY) -9200 + (ID) 2950
Total energy: -109188.0 ( -64.72 by residue)
QMean score : 0.348
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