Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDKKTFEENLQELETIVSRLETGDVALEDAIAEFQKGML-ISKELQRTLKEAEETLVKVMQADGTEVEMDT
1W53 Chain:A ((24-63))
-------ETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAY----
General information:
TITO was launched using:
RESULT:
Template:
1W53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1024 for 156 contacts (-6.6/contact) +
2D Compatibility (PS) -4333 + (NN) -2975 + (LL) 808
1D Compatibility (HY) -400 + (ID) 300
Total energy: -8224.0 ( -52.72 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1W53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W53-query.scw
PDB file :
Tito_Scwrl_1W53.pdb
: