Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKVLVSSLLVLGITITLQTVVEAKGPKVAYTQEGMTALSDTNKDKVTTISIDEIQKSLEGKKPITVSFDIDDTLLFSSQYFQYGKEYVTPGSFDFLHKQKFWDLVAKRGDQDSIPKEYAKKLIAMHQKRGDKIVFITGRTRGSMYKEGEVDKTAKALAKDFKLD----KPIAVNYTGDKPKKPYKYDKSYYIKKYGSDIHYGDSDDDIHAAREAGARPIRILRAPNSTNLPLPEAGGYGEEVLENSAY
1N8N Chain:A ((24-212))-------------------------------------------------VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS------PTKTETVSKTLADNFHIPATNMNPVI--FAGDKPG---QNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY


General information:
TITO was launched using:
RESULT:

Template: 1N8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -15871 for 1501 contacts (-10.6/contact) +
2D Compatibility (PS) -20570 + (NN) -15200 + (LL) 4416
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -65775.0 ( -43.82 by residue)
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_1N8N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N8N-query.scw
PDB file : Tito_Scwrl_1N8N.pdb: