Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVYENKEELKKEISKTFEKYIMEFNNIPENLKDKRIDEVDRTPAENLSYQVGWTNLVLKWEEDERKGLQVKTPSDKFKW---NQLGELYQWFTDTYAHLSLQELKAKLNENINSIYAMIDLLSEEELFEAHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL |
3UJE Chain:A ((253-293)) | ---------------------------------------------------------------DGKYDLDFKSPTDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1483 for 141 contacts (-10.5/contact) +
2D Compatibility (PS) -3824 + (NN) -1180 + (LL) 4892
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -5495.0 ( -38.97 by residue)
QMean score : 0.396
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