Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRLVKIVTIIRNNKIRTLIFVMGSLILLFPIVSQVSYYLASHQNINQFKREVAKIDTNTVERRIALANAYNETLS-RNPLLIDPFTSKQKE-GLREYARMLEVHEQIGHVAIPSIGVDIPIYAGTSETVLQKGSGHLEGTSLPVGGLSTHSVLTAHRGLPTARLFTDLNKVKKGQIFYVTNIKETLAYKVVSIKVVDPTALSEVKIVNGKDYITLLTCTPYMINSHRLLVKGERIPYDSTEAEKHKEQTVQDYRLSLVLKILLVLLIGLFIVIMMRRWMQHRQ |
| 3TB7 Chain:A ((5-203)) | ---------------------------------------------NINAFKEAVTKIDRVEINRRLELAYAYNASIAG-------PYSAEQKQAGVVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYV--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92042 for 1612 contacts (-57.1/contact) +
2D Compatibility (PS) -20312 + (NN) -8361 + (LL) 10388
1D Compatibility (HY) -21200 + (ID) 5800
Total energy: -137327.0 ( -85.19 by residue)
QMean score : 0.503
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