Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTALNIPFTVEGIENYYQNIKMILSLADKWSIPKDDLLLFLKGLKAIDDIKVGSPIFKYFWTSLSLQAPLKALEFVLEQAKMPTELSGELSE-TQYLVAQFSDELAPHDDFWIALS---------QVIYDSFPGNSLAEDTVLNRKLHQFRY---------------------------LISSQQAQYVRRYFKDVGMTDRDALVNYLSCLREPDNIAYYESARLHNKRRRNGEIFAFPDDEPVINSK---LLISFHTEFIIDDKGNFLNEIDAEVITSNGIINGASFNYA------FKNNTRHKELDVDPVKLDPKFRNDMTRGYRSPNLSRRKWFFFKEEDYDCSYFNKKGYYAFGRRSAKQSVDKQVKYLKKAVQKMRLN |
1WA5 Chain:C ((227-492)) | -------------------------------------------------DNIQVGMGIFHKY---LSYSNPLL------EHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSISNQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEG---TRRRACTDFLKELKEKNEVLVTNIFLAHMK----GFVDQYMS-----NWKFKDLYIYLFTALAIN--GNITN---AGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20312 for 1283 contacts (-15.8/contact) +
2D Compatibility (PS) -20902 + (NN) 3472 + (LL) 6144
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -49148.0 ( -38.31 by residue)
QMean score : 0.171
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