Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNT-CGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVAS-YLKKYPQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDY-LFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELGLGNGPVNHTSYQGD |
| 4C5L Chain:A ((3-264)) | ---LKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLETALS-IGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCKGE----NPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGG------KSYDLYYDGQTFYQLTTDMF--SYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127025 for 2260 contacts (-56.2/contact) +
2D Compatibility (PS) -26994 + (NN) -9012 + (LL) 1064
1D Compatibility (HY) -14800 + (ID) 4900
Total energy: -181667.0 ( -80.38 by residue)
QMean score : 0.393
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