Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIILQGNKIERSFSGDVLFDNINIQVDQRDRIALVGRNGAGKSTLLKILVGEETPTKGEINKKRDLSLSYLAQDSRFQSENTIFQEMLQVFDSLREVEKRL----RELELQMGQVSGSDLEQLMKTYDILSEEFREKGGFTYESDIKAILNGFKFNSDMWEMPISELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDID---TIAWLENYLVNYQGALIIVSHDRYFLDKVATVTYDLTTHSLDRYVGNYSKFMDLKAEKIATEEKNFEKQQKEIAKLEDFVQRNIVRASTTKRAQARRKQLEKMERLDKPNVEQKSANMTFHAGKVSGNVVLTLENAAIGYEGVSLSELIDLDVKKFDAIAIVGPNGIGKSTLIKSLVG-QIPFIKGEAKLGANVETGYYDQSQSNLTKTNTVLDELWNAFSTTP------EVEIRNRLGAFLFSGDDVKKLVSMLSGGERARLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIEF----DGTLLFVSHDRYFINRVATKVLEISDKGSTLYLGDYDYYLTKKAELEELARLNEEEVSASKTEIDVTSDYETQKANQKEFRKITRRIAEIEVRLEVLENNENNINGLMLETNDIGKLSDLQKELESIQEEQLLLMEEWENLNMRLDL |
| 3J15 Chain:B ((106-529)) | -------------------------------VGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRGN-----------ELQNYFERLKNGEIRPVVKPQYVDLLPKAVKGK-VRELLKKVD-------EVGKFEEVVKELELEN-------VLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVI-----HVVYGEPGVYGIFSKPKGTRNGINEFLQGYLKDENVRFRPY---EIRFTKLSERVDVERETLVEYPRLVKD----------------YGSFKLEVEPG---------------EIRKGEVIGIVGPNGIGKTTFVKMLAGVEEP---TEGKVEWDLTVAY--KPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGII----DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREGMNRFLASVGITFRRDPDSGRPRANKEGSVKDREQKARGEYYYA------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69616 for 3125 contacts (-22.3/contact) +
2D Compatibility (PS) -42764 + (NN) -10865 + (LL) 11440
1D Compatibility (HY) -23600 + (ID) 6050
Total energy: -141455.0 ( -45.27 by residue)
QMean score : 0.299
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