Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIFSAIDSKFWASIMENPWMILIHLMDIIIVAVLIYKFIKALAGTKIMSLIQGVILFIIIRFVSEWIGLTTITFLMNQIVTYGVIAGVVIFAPEIRTGLEKFGRTPQLFTQRSQLSSDEKLVDALVKAVAYMSPRKIGALIS-IERTQTLQEYIATGIPLDADISSELLINIFIPNTPLHDGAVIVKDK--KIATACSYLPLSESSSISKEFGTRHRAAIGLSENSDALTVIVSEETGGISVALKGEFLHDLSKDSFEAILRTQLIQNQEENSKLAWYNQLLRRK |
| 4YVZ Chain:A ((57-159)) | ------------------------------------------------------------------------------------------------------------------------------------------GALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHL-VPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53015 for 707 contacts (-75.0/contact) +
2D Compatibility (PS) -10852 + (NN) -3185 + (LL) 13984
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -61468.0 ( -86.94 by residue)
QMean score : 0.494
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