Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLFLSPSCTSCRKARAWLSKHEVAFEEHNIITSPLNKE---ELLQILSFTENGTEDIISTRSKVFQKLAIDVDELSTSSLMELISENPSLLRRPIILDKKRMQIGFNEDEIRAFLPRDYRKQELKQATIRAEIEGKHD
3RDW Chain:A ((7-120))
-VTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSD--ARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RDW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83159 for 811 contacts (-102.5/contact) +
2D Compatibility (PS) -11255 + (NN) -1231 + (LL) 1596
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -104549.0 ( -128.91 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3RDW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RDW-query.scw
PDB file :
Tito_Scwrl_3RDW.pdb
: