Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYKQEDFSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLE--NEADTLAAFYENRVIAILEKRGNEFKPHKVLL |
| 1R3E Chain:A ((1-272)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEE---RECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRD-----VSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLN---VFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWD---GFKKGEVVRVFNEEGRLLALAEAER |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91612 for 2080 contacts (-44.0/contact) +
2D Compatibility (PS) -28132 + (NN) -308 + (LL) 1096
1D Compatibility (HY) -18000 + (ID) 5000
Total energy: -141956.0 ( -68.25 by residue)
QMean score : 0.422
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