Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MRESIFEETAKGKVS---RHVLLTILLALILLFTADFLTYIIIELIISLD-FWKLEW---------------------DSDIVQLIILLATSISTVMLFMWVKFKEKRPISSL--------GLFKEGALTEL--SRGWLVESVLFGACLILTIISG-----SGVIETVRFTADKL-------IWFLIFA----VGWQVQSASVEILCRGWLLPVSAT---KYSKIVSVSISSIFFGLLHSANNHVSLISIFNLCLFGLFLSLYVILKGNIWGACGIHGAWNCVQGSVFG-----IEVSGEPMLSNSLVHVKTYGADWISGGKFGVEGSMITSIVLIVACYWLYQKSNFPYD |
| 4V1S Chain:A ((37-395)) | PGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSFIWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAKWYNSINGALNDPGYFAFSIIDSWFDMYDTDKNTVWLTKAFH-AINFIHNKLRDGNGRYPEHWGTPTTSNL--------------EKYDLRFSTVAAYMYMRAANYKRILN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301587 for 2217 contacts (-136.0/contact) +
2D Compatibility (PS) -27260 + (NN) 1528 + (LL) 624
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -339295.0 ( -153.04 by residue)
QMean score : 0.223
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