Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDAL----DLEYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
2G64 Chain:A ((67-135)) | ------------------------------------------------------DLAKLKKEMSLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEETPKNIFTYKGS-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G64.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15358 for 363 contacts (42.3/contact) +
2D Compatibility (PS) -6674 + (NN) -2117 + (LL) 8616
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 11383.0 ( 31.36 by residue)
QMean score : 0.149
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